Runs of homozygosity reveal past bottlenecks and contemporary inbreeding across diverging populations of an island-colonizing bird [Dataset]

Methods: Whole genome data from six populations of Berthelot's pipit across the three archipelagos of their range in the North Atlantic. Resequencing data was generated by mapping Illumina HiSeq reads to a reference genome and calling variants using GATK HaplotypeCaller.

Detalhes bibliográficos
Autores: Martin, Claudia A., Sheppard, Eleanor C., Illera, Juan Carlos, Suh, Alexander, Nadachowska-Brzyska, Krystyna, Spurgin, Lewis G., Richardson, David S.
Tipo de documento: conjunto de datos
Data de publicação:2023
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositório:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/364602
Acesso em linha:http://hdl.handle.net/10261/364602
Access Level:Acceso aberto
Palavra-chave:Effective population size
Inbreeding
Biological sciences
Bottleneck
Island speciation
Runs of homozygosity (ROH)
Whole-genome resequencing
Descrição
Resumo:Methods: Whole genome data from six populations of Berthelot's pipit across the three archipelagos of their range in the North Atlantic. Resequencing data was generated by mapping Illumina HiSeq reads to a reference genome and calling variants using GATK HaplotypeCaller.

Registros relacionados