Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites

Artículo principal: 26 Páginas; Tablas y Fuguras: 13 P´ginas; 7 Figuras; 2 Tablas

Detalles Bibliográficos
Autores: Roca, María, Ríos Martín, José Julián, Pérez Gálvez, Antonio
Tipo de recurso: artículo
Estado:Versión aceptada para publicación
Fecha de publicación:2017
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/158076
Acceso en línea:http://hdl.handle.net/10261/158076
Access Level:acceso abierto
Palabra clave:Chlorophyll catabolism
Mass spectrometry
Phyllobilins
Structure elucidation
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spelling Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolitesRoca, MaríaRíos Martín, José JuliánPérez Gálvez, AntonioChlorophyll catabolismMass spectrometryPhyllobilinsStructure elucidationArtículo principal: 26 Páginas; Tablas y Fuguras: 13 P´ginas; 7 Figuras; 2 TablasSenescence and ripening of plant tissues engage the pheophorbide a oxygenase pathway, reducing the chlorophyll content to inactive chlorophyll catabolite products, termed phyllobilins. These products are open-macrocycle derivatives, but present different structural features related to species-dependent enzyme activity. This review encompasses a brief outline of the chlorophyll catabolism pathway, a detailed description of the structural motifs of known phyllobilins, giving details of how mass spectrometry provides hints for the characterization of phyllobilins. The structural approach for the identification of phyllobilins requires several spectroscopic methodologies to reach a complete structural identification, including UV–visible spectroscopy, circular dichroism, nuclear magnetic resonance and mass spectrometry. Among these techniques, mass spectrometry presents several advantages for showing the structural features of phyllobilins, through acquisition of accurate mass, elemental composition, and detection of product ions, which provide valuable structural information. The combination of mass spectra with data-managing and in silico prediction tools greatly enhances the comprehensive building of the phyllobilin structure, and the resolving of the intriguing puzzle of enzymatic and chemical reactions involved in chlorophyll catabolism. Indeed, some strategies based on structural constraints that phyllobilins present, with recent developments in software prediction tools are proposed to foster the unravelling of phyllobilin structures.This work was supported by the Comisión Interministerial de Ciencia y Tecnología (CICYT-EU, Spanish and European Government, AGL 2015-63890-R). All the authors contributed equally to the performance and writing of this review.Peer reviewedSpringer NatureComisión Interministerial de Ciencia y Tecnología, CICYT (España)Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]201720172017info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Postprintinfo:eu-repo/semantics/acceptedVersionhttp://hdl.handle.net/10261/158076reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL 2015-63890-Rhttp://dx.doi.org/10.1007/s11101-017-9543-zSíinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/1580762026-05-22T06:33:51Z
dc.title.none.fl_str_mv Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
title Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
spellingShingle Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
Roca, María
Chlorophyll catabolism
Mass spectrometry
Phyllobilins
Structure elucidation
title_short Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
title_full Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
title_fullStr Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
title_full_unstemmed Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
title_sort Mass spectrometry: the indispensable tool for plant metabolomics of colourless chlorophyll catabolites
dc.creator.none.fl_str_mv Roca, María
Ríos Martín, José Julián
Pérez Gálvez, Antonio
author Roca, María
author_facet Roca, María
Ríos Martín, José Julián
Pérez Gálvez, Antonio
author_role author
author2 Ríos Martín, José Julián
Pérez Gálvez, Antonio
author2_role author
author
dc.contributor.none.fl_str_mv Comisión Interministerial de Ciencia y Tecnología, CICYT (España)
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Chlorophyll catabolism
Mass spectrometry
Phyllobilins
Structure elucidation
topic Chlorophyll catabolism
Mass spectrometry
Phyllobilins
Structure elucidation
description Artículo principal: 26 Páginas; Tablas y Fuguras: 13 P´ginas; 7 Figuras; 2 Tablas
publishDate 2017
dc.date.none.fl_str_mv 2017
2017
2017
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Postprint
info:eu-repo/semantics/acceptedVersion
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/158076
url http://hdl.handle.net/10261/158076
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL 2015-63890-R
http://dx.doi.org/10.1007/s11101-017-9543-z
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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