Supplementary Materials: Spread of Pseudomonas aeruginosa ST274 clone in different niches: Resistome, virulome, and phylogenetic relationship
Table S1. Characteristics of the 11 studied ST274-Pseudomonas aeruginosa recovered from different origins; Table S2. Characteristics of the genomes of 14 reference ST274-P. aeruginosa strains and control strains PAO1 and PA14 downloaded from the NCBI database; Table S3. Single-nucleotide polymorphis...
| Autores: | , , , , , |
|---|---|
| Tipo de recurso: | conjunto de datos |
| Fecha de publicación: | 2023 |
| País: | España |
| Institución: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repositorio: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/353388 |
| Acceso en línea: | http://hdl.handle.net/10261/353388 |
| Access Level: | acceso abierto |
| Sumario: | Table S1. Characteristics of the 11 studied ST274-Pseudomonas aeruginosa recovered from different origins; Table S2. Characteristics of the genomes of 14 reference ST274-P. aeruginosa strains and control strains PAO1 and PA14 downloaded from the NCBI database; Table S3. Single-nucleotide polymorphisms (number of SNPs) in the core genome among the 11 studied ST274-P. aeruginosa, the 14 reference ST274-P. aeruginosa genomes, and the two control genomes; Table S4. Pangenome determined using Roary in all 25 ST274-P. aeruginosa strains and the control strains PAO1 and PA14; Table S5. Acquired genes in ST274-P. aeruginosa with Resfinder prediction; Table S6. Dataset and function of the 170 antimicrobial resistance genes analyzed to determine the mutational resistome of the ST274-P. aeruginosa strains; Table S7. Mutational resistome of the 25 studied ST274-P. aeruginosa strains with respect to PAO1 genome; Table S8. Detection of alterations in the mutome genes (involved in the mutator phenotype) of the 11 studied ST274-P. aeruginosa strains and the 14 reference ST274-P. aeruginosa genomes, with respect to PAO1 genome; Table S9. Dataset and functions of the 250 virulence genes analyzed to determine the virulome of the ST274-P. aeruginosa strains; Table S10. Amino acid changes in virulome of the 25 studied ST274-P. aeruginosa strains with respect to the PAO1 genome. |
|---|