Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life

The modern era of analytical and quantitative palaeobiology has only just begun, integrating methods such as morphological and molecular phylogenetics and divergence time estimation, as well as phenotypic and molecular rates of evolution. Calibrating the tree of life to geological time is at the nex...

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Autores: López-Antoñanzas, Raquel, Milchell, Jonathan, Simões, Tiago R., Condamine, Fabien L., Aguilée, Robin, Peláez-Campomanes, Pablo, Renaud, Sabrina, Rolland, Jonathan, Donoghue, Philip C.J.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2022
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/280630
Acceso en línea:http://hdl.handle.net/10261/280630
Access Level:acceso abierto
Palabra clave:Taxonomy
Morphometrics
Phylogeny
Evolution
Morphological clock
Biodiversity
Palaeobiogeography
Macroevolution
http://metadata.un.org/sdg/15
Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity loss
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spelling Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of LifeLópez-Antoñanzas, RaquelMilchell, JonathanSimões, Tiago R.Condamine, Fabien L.Aguilée, RobinPeláez-Campomanes, PabloRenaud, SabrinaRolland, JonathanDonoghue, Philip C.J.TaxonomyMorphometricsPhylogenyEvolutionMorphological clockBiodiversityPalaeobiogeographyMacroevolutionhttp://metadata.un.org/sdg/15Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity lossThe modern era of analytical and quantitative palaeobiology has only just begun, integrating methods such as morphological and molecular phylogenetics and divergence time estimation, as well as phenotypic and molecular rates of evolution. Calibrating the tree of life to geological time is at the nexus of many disparate disciplines, from palaeontology to molecular systematics and from geochronology to comparative genomics. Creating an evolutionary time scale of the major events that shaped biodiversity is key to all of these fields and draws from each of them. Different methodological approaches and data employed in various disciplines have traditionally made collaborative research efforts difficult among these disciplines. However, the development of new methods is bridging the historical gap between fields, providing a holistic perspective on organismal evolutionary history, integrating all of the available evidence from living and fossil species. Because phylogenies with only extant taxa do not contain enough information to either calibrate the tree of life or fully infer macroevolutionary dynamics, phylogenies should preferably include both extant and extinct taxa, which can only be achieved through the inclusion of phenotypic data. This integrative phylogenetic approach provides ample and novel opportunities for evolutionary biologists to benefit from palaeontological data to help establish an evolutionary time scale and to test core macroevolutionary hypotheses about the drivers of biological diversification across various dimensions of organisms.ANR-AAPG 2022. PGC2018-094122-B-100 (MICU/AEI/FEDER, EU). National Science and Engineering Research Council of Canada (NSERC) postdoctoral fellowship to T.R.S.Peer reviewedMultidisciplinary Digital Publishing InstituteMinisterio de Ciencia e Innovación (España)National Research Council of CanadaConsejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202220222022info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/280630reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/MICINN//PGC2018-094122-B-100https://doi.org/10.3390/biology11081185Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2806302026-05-22T06:33:51Z
dc.title.none.fl_str_mv Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
title Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
spellingShingle Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
López-Antoñanzas, Raquel
Taxonomy
Morphometrics
Phylogeny
Evolution
Morphological clock
Biodiversity
Palaeobiogeography
Macroevolution
http://metadata.un.org/sdg/15
Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity loss
title_short Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
title_full Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
title_fullStr Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
title_full_unstemmed Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
title_sort Integrative Phylogenetics: Tools for Palaeontologists to Explore the Tree of Life
dc.creator.none.fl_str_mv López-Antoñanzas, Raquel
Milchell, Jonathan
Simões, Tiago R.
Condamine, Fabien L.
Aguilée, Robin
Peláez-Campomanes, Pablo
Renaud, Sabrina
Rolland, Jonathan
Donoghue, Philip C.J.
author López-Antoñanzas, Raquel
author_facet López-Antoñanzas, Raquel
Milchell, Jonathan
Simões, Tiago R.
Condamine, Fabien L.
Aguilée, Robin
Peláez-Campomanes, Pablo
Renaud, Sabrina
Rolland, Jonathan
Donoghue, Philip C.J.
author_role author
author2 Milchell, Jonathan
Simões, Tiago R.
Condamine, Fabien L.
Aguilée, Robin
Peláez-Campomanes, Pablo
Renaud, Sabrina
Rolland, Jonathan
Donoghue, Philip C.J.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Ministerio de Ciencia e Innovación (España)
National Research Council of Canada
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Taxonomy
Morphometrics
Phylogeny
Evolution
Morphological clock
Biodiversity
Palaeobiogeography
Macroevolution
http://metadata.un.org/sdg/15
Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity loss
topic Taxonomy
Morphometrics
Phylogeny
Evolution
Morphological clock
Biodiversity
Palaeobiogeography
Macroevolution
http://metadata.un.org/sdg/15
Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity loss
description The modern era of analytical and quantitative palaeobiology has only just begun, integrating methods such as morphological and molecular phylogenetics and divergence time estimation, as well as phenotypic and molecular rates of evolution. Calibrating the tree of life to geological time is at the nexus of many disparate disciplines, from palaeontology to molecular systematics and from geochronology to comparative genomics. Creating an evolutionary time scale of the major events that shaped biodiversity is key to all of these fields and draws from each of them. Different methodological approaches and data employed in various disciplines have traditionally made collaborative research efforts difficult among these disciplines. However, the development of new methods is bridging the historical gap between fields, providing a holistic perspective on organismal evolutionary history, integrating all of the available evidence from living and fossil species. Because phylogenies with only extant taxa do not contain enough information to either calibrate the tree of life or fully infer macroevolutionary dynamics, phylogenies should preferably include both extant and extinct taxa, which can only be achieved through the inclusion of phenotypic data. This integrative phylogenetic approach provides ample and novel opportunities for evolutionary biologists to benefit from palaeontological data to help establish an evolutionary time scale and to test core macroevolutionary hypotheses about the drivers of biological diversification across various dimensions of organisms.
publishDate 2022
dc.date.none.fl_str_mv 2022
2022
2022
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/280630
url http://hdl.handle.net/10261/280630
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/MICINN//PGC2018-094122-B-100
https://doi.org/10.3390/biology11081185
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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