Genome-wide diversity in the levant reveals recent structuring by culture

The Levant is a region in the Near East with an impressive record of continuous human existence and major cultural developments since the Paleolithic period. Genetic and archeological studies present solid evidence placing the Middle East and the Arabian Peninsula as the first stepping-stone outside...

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Autores: Haber, Marc, 1980-, Gauguier, Dominique, Youhanna, Sonia, Patterson, Nick, Moorjani, Priya, Botigué, Laura R., Platt, Daniel E., Matisoo Smith, Elizabeth, Soria Hernanz, David F, Wells, R. Spencer, Bertranpetit, Jaume, 1952-, Tyler-Smith, Chris, Comas, David, 1969-, Zalloua, Pierre A.
Tipo de documento: artigo
Estado:Versão publicada
Data de publicação:2013
País:España
Recursos:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Repositório:Recercat. Dipósit de la Recerca de Catalunya
OAI Identifier:oai:recercat.cat:10230/23440
Acesso em linha:http://hdl.handle.net/10230/23440
http://dx.doi.org/10.1371/journal.pgen.1003316
Access Level:Acceso aberto
Palavra-chave:Genètica de poblacions
ADN mitocondrial -- Genètica
Cromosomes humans
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spelling Genome-wide diversity in the levant reveals recent structuring by cultureHaber, Marc, 1980-Gauguier, DominiqueYouhanna, SoniaPatterson, NickMoorjani, PriyaBotigué, Laura R.Platt, Daniel E.Matisoo Smith, ElizabethSoria Hernanz, David FWells, R. SpencerBertranpetit, Jaume, 1952-Tyler-Smith, ChrisComas, David, 1969-Zalloua, Pierre A.Genètica de poblacionsADN mitocondrial -- GenèticaCromosomes humansThe Levant is a region in the Near East with an impressive record of continuous human existence and major cultural developments since the Paleolithic period. Genetic and archeological studies present solid evidence placing the Middle East and the Arabian Peninsula as the first stepping-stone outside Africa. There is, however, little understanding of demographic changes in the Middle East, particularly the Levant, after the first Out-of-Africa expansion and how the Levantine peoples relate genetically to each other and to their neighbors. In this study we analyze more than 500,000 genome-wide SNPs in 1,341 new samples from the Levant and compare them to samples from 48 populations worldwide. Our results show recent genetic stratifications in the Levant are driven by the religious affiliations of the populations within the region. Cultural changes within the last two millennia appear to have facilitated/maintained admixture between culturally similar populations from the Levant, Arabian Peninsula, and Africa. The same cultural changes seem to have resulted in genetic isolation of other groups by limiting admixture with culturally different neighboring populations. Consequently, Levant populations today fall into two main groups: one sharing more genetic characteristics with modern-day Europeans and Central Asians, and the other with closer genetic affinities to other Middle Easterners and Africans. Finally, we identify a putative Levantine ancestral component that diverged from other Middle Easterners 23,700–15,500 years ago during the last glacial period, and diverged from Europeans 15,900–9,100 years ago between the last glacial warming and the start of the NeolithicThis study was partly supported by the Lebanese American University and the National Geographic Society (The Genographic Project). CT-S was supported by grant number 098051 from The Wellcome Trust. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscriptPublic Library of Science (PLoS)201520152013info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/pdfhttp://hdl.handle.net/10230/23440http://dx.doi.org/10.1371/journal.pgen.1003316reponame:Recercat. Dipósit de la Recerca de Catalunyainstname:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)InglésPLoS Genetics. 2013;9(2):e1003316info:eu-repo/grantAgreement/EC/FP7/098051© Haber et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are creditedinfo:eu-repo/semantics/openAccessoai:recercat.cat:10230/234402026-05-29T05:05:01Z
dc.title.none.fl_str_mv Genome-wide diversity in the levant reveals recent structuring by culture
title Genome-wide diversity in the levant reveals recent structuring by culture
spellingShingle Genome-wide diversity in the levant reveals recent structuring by culture
Haber, Marc, 1980-
Genètica de poblacions
ADN mitocondrial -- Genètica
Cromosomes humans
title_short Genome-wide diversity in the levant reveals recent structuring by culture
title_full Genome-wide diversity in the levant reveals recent structuring by culture
title_fullStr Genome-wide diversity in the levant reveals recent structuring by culture
title_full_unstemmed Genome-wide diversity in the levant reveals recent structuring by culture
title_sort Genome-wide diversity in the levant reveals recent structuring by culture
dc.creator.none.fl_str_mv Haber, Marc, 1980-
Gauguier, Dominique
Youhanna, Sonia
Patterson, Nick
Moorjani, Priya
Botigué, Laura R.
Platt, Daniel E.
Matisoo Smith, Elizabeth
Soria Hernanz, David F
Wells, R. Spencer
Bertranpetit, Jaume, 1952-
Tyler-Smith, Chris
Comas, David, 1969-
Zalloua, Pierre A.
author Haber, Marc, 1980-
author_facet Haber, Marc, 1980-
Gauguier, Dominique
Youhanna, Sonia
Patterson, Nick
Moorjani, Priya
Botigué, Laura R.
Platt, Daniel E.
Matisoo Smith, Elizabeth
Soria Hernanz, David F
Wells, R. Spencer
Bertranpetit, Jaume, 1952-
Tyler-Smith, Chris
Comas, David, 1969-
Zalloua, Pierre A.
author_role author
author2 Gauguier, Dominique
Youhanna, Sonia
Patterson, Nick
Moorjani, Priya
Botigué, Laura R.
Platt, Daniel E.
Matisoo Smith, Elizabeth
Soria Hernanz, David F
Wells, R. Spencer
Bertranpetit, Jaume, 1952-
Tyler-Smith, Chris
Comas, David, 1969-
Zalloua, Pierre A.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Genètica de poblacions
ADN mitocondrial -- Genètica
Cromosomes humans
topic Genètica de poblacions
ADN mitocondrial -- Genètica
Cromosomes humans
description The Levant is a region in the Near East with an impressive record of continuous human existence and major cultural developments since the Paleolithic period. Genetic and archeological studies present solid evidence placing the Middle East and the Arabian Peninsula as the first stepping-stone outside Africa. There is, however, little understanding of demographic changes in the Middle East, particularly the Levant, after the first Out-of-Africa expansion and how the Levantine peoples relate genetically to each other and to their neighbors. In this study we analyze more than 500,000 genome-wide SNPs in 1,341 new samples from the Levant and compare them to samples from 48 populations worldwide. Our results show recent genetic stratifications in the Levant are driven by the religious affiliations of the populations within the region. Cultural changes within the last two millennia appear to have facilitated/maintained admixture between culturally similar populations from the Levant, Arabian Peninsula, and Africa. The same cultural changes seem to have resulted in genetic isolation of other groups by limiting admixture with culturally different neighboring populations. Consequently, Levant populations today fall into two main groups: one sharing more genetic characteristics with modern-day Europeans and Central Asians, and the other with closer genetic affinities to other Middle Easterners and Africans. Finally, we identify a putative Levantine ancestral component that diverged from other Middle Easterners 23,700–15,500 years ago during the last glacial period, and diverged from Europeans 15,900–9,100 years ago between the last glacial warming and the start of the Neolithic
publishDate 2013
dc.date.none.fl_str_mv 2013
2015
2015
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10230/23440
http://dx.doi.org/10.1371/journal.pgen.1003316
url http://hdl.handle.net/10230/23440
http://dx.doi.org/10.1371/journal.pgen.1003316
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv PLoS Genetics. 2013;9(2):e1003316
info:eu-repo/grantAgreement/EC/FP7/098051
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Public Library of Science (PLoS)
publisher.none.fl_str_mv Public Library of Science (PLoS)
dc.source.none.fl_str_mv reponame:Recercat. Dipósit de la Recerca de Catalunya
instname:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
instname_str Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
reponame_str Recercat. Dipósit de la Recerca de Catalunya
collection Recercat. Dipósit de la Recerca de Catalunya
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