Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov

8 páginas, 1 tabla. 2 figuras

Bibliographic Details
Authors: Carro, Lorena, Golińska, Patrycja, Saati-Santamaría, Zaki, Igual, José Mariano, Klenk, Hans-Peter, Goodfellow, Michael
Format: article
Status:Published version
Publication Date:2024
Country:España
Institution:Consejo Superior de Investigaciones Científicas (CSIC)
Repository:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/366026
Online Access:http://hdl.handle.net/10261/366026
https://api.elsevier.com/content/abstract/scopus_id/85200602022
Access Level:Open access
Keyword:Desert
Micromonospora
Polyphasic taxonomy
Tolerance
deserts
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spelling Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. novCarro, LorenaGolińska, PatrycjaSaati-Santamaría, ZakiIgual, José MarianoKlenk, Hans-PeterGoodfellow, MichaelDesertMicromonosporaPolyphasic taxonomyTolerancedeserts8 páginas, 1 tabla. 2 figurasSeveral strains were isolated from subsurface soil of the Atacama Desert and were previously assigned to the Micromonospora genus. A polyphasic study was designed to determine the taxonomic affiliation of isolates 4G51T, 4G53, and 4G57. All the strains showed chemotaxonomic properties in line with their classification in the genus Micromonospora, including meso-diaminopimelic acid in the cell wall peptidoglycan, MK-9(H4) as major respiratory quinone, iso-C15:0 and iso-C16:0 as major fatty acids and diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol as major polar lipids. The 16S rRNA gene sequences of strains 4G51T, 4G53, and 4G57 showed the highest similarity (97.9 %) with the type strain of Micromonospora costi CS1-12T, forming an independent branch in the phylogenetic gene tree. Their independent position was confirmed with genome phylogenies, being most closely related to the type strain of Micromonospora kangleipakensis. Digital DNA-DNA hybridization and average nucleotide identity analyses between the isolates and their closest phylogenomic neighbours confirmed that they should be assigned to a new species within the genus Micromonospora for which the name Micromonospora sicca sp. nov. (4G51T=PCM 3031T=LMG 30756T) is proposed.This work was supported by Ramon y Cajal grant (AEI) (RYC2019-028311-I), BBSRC grant (BB/L024209/1), a Royal Society UK–Chile International Joint Project grant (JIC CA584), a Grant TED2021- 129160B-I00 funded by MCIN/AEI/10.13039/501100011033 and by the “European Union NextGenerationEU/PRTR”, and by Grant No. 2017/01/X/NZ8/00140 from the National Science Centre (NCN) in Poland.Peer reviewedElsevierMinisterio de Ciencia e Innovación (España)National Science Centre (Poland)Igual, José Mariano [0000-0002-5080-0378]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202420242024info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/366026https://api.elsevier.com/content/abstract/scopus_id/85200602022reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)InglésSystematic and applied microbiologyhttps://doi.org/10.1016/j.syapm.2024.126542Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3660262026-05-22T06:33:51Z
dc.title.none.fl_str_mv Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
title Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
spellingShingle Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
Carro, Lorena
Desert
Micromonospora
Polyphasic taxonomy
Tolerance
deserts
title_short Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
title_full Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
title_fullStr Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
title_full_unstemmed Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
title_sort Atacama desert is a source of new Micromonospora strains: description of Micromonospora sicca sp. nov
dc.creator.none.fl_str_mv Carro, Lorena
Golińska, Patrycja
Saati-Santamaría, Zaki
Igual, José Mariano
Klenk, Hans-Peter
Goodfellow, Michael
author Carro, Lorena
author_facet Carro, Lorena
Golińska, Patrycja
Saati-Santamaría, Zaki
Igual, José Mariano
Klenk, Hans-Peter
Goodfellow, Michael
author_role author
author2 Golińska, Patrycja
Saati-Santamaría, Zaki
Igual, José Mariano
Klenk, Hans-Peter
Goodfellow, Michael
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Ministerio de Ciencia e Innovación (España)
National Science Centre (Poland)
Igual, José Mariano [0000-0002-5080-0378]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Desert
Micromonospora
Polyphasic taxonomy
Tolerance
deserts
topic Desert
Micromonospora
Polyphasic taxonomy
Tolerance
deserts
description 8 páginas, 1 tabla. 2 figuras
publishDate 2024
dc.date.none.fl_str_mv 2024
2024
2024
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/366026
https://api.elsevier.com/content/abstract/scopus_id/85200602022
url http://hdl.handle.net/10261/366026
https://api.elsevier.com/content/abstract/scopus_id/85200602022
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Systematic and applied microbiology
https://doi.org/10.1016/j.syapm.2024.126542
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15,811543

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