Food transcriptomics - An overview

The transcriptome can be defined as the complete set of RNA transcripts produced by the genome at any one time, and transcriptomics as the study of these transcripts. Recent advances in high-throughput technologies have made available groundbreaking methods that enable the characterization of transc...

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Detalhes bibliográficos
Autores: Simó, Carolina, García-Cañas, Virginia
Formato: otro
Estado:Versión aceptada para publicación
Fecha de publicación:2019
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/206235
Acesso em linha:http://hdl.handle.net/10261/206235
Access Level:acceso abierto
Palavra-chave:Fermentation
Food
Foodborne pathogens
Gene expression
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repository_id_str
spelling Food transcriptomics - An overviewSimó, CarolinaGarcía-Cañas, VirginiaFermentationFoodFoodborne pathogensGene expressionThe transcriptome can be defined as the complete set of RNA transcripts produced by the genome at any one time, and transcriptomics as the study of these transcripts. Recent advances in high-throughput technologies have made available groundbreaking methods that enable the characterization of transcriptomes in great detail. The most relevant application of transcriptomic technologies in modern food science include the transcriptome characterization and gene expression analysis in individual organisms, such as food crops, food animals, foodborne pathogens, fermenting microorganisms, and probiotics. As next-generation genome sequencing technologies mature, RNA-seq, a method to detect the presence and quantity of RNA in a given sample, combined with bioinformatics is gaining traction in the investigation of topics in food science that were inconceivable only few years ago (e.g. identification of novel genes not possible previously due to limitations of earlier technologies). Also, this next-generation technology is expected to revolutionize the food microbiology research field by allowing the time- and cost-effective analysis of food microbial communities.Peer reviewedElsevierConsejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202020202019info:eu-repo/semantics/otherhttp://purl.org/coar/resource_type/c_3248Postprintinfo:eu-repo/semantics/acceptedVersioninfo:eu-repo/semantics/bookParthttp://hdl.handle.net/10261/206235reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Ingléshttps://doi.org/10.1016/B978-0-08-100596-5.22555-9Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2062352026-05-22T06:33:51Z
dc.title.none.fl_str_mv Food transcriptomics - An overview
title Food transcriptomics - An overview
spellingShingle Food transcriptomics - An overview
Simó, Carolina
Fermentation
Food
Foodborne pathogens
Gene expression
title_short Food transcriptomics - An overview
title_full Food transcriptomics - An overview
title_fullStr Food transcriptomics - An overview
title_full_unstemmed Food transcriptomics - An overview
title_sort Food transcriptomics - An overview
dc.creator.none.fl_str_mv Simó, Carolina
García-Cañas, Virginia
author Simó, Carolina
author_facet Simó, Carolina
García-Cañas, Virginia
author_role author
author2 García-Cañas, Virginia
author2_role author
dc.contributor.none.fl_str_mv Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Fermentation
Food
Foodborne pathogens
Gene expression
topic Fermentation
Food
Foodborne pathogens
Gene expression
description The transcriptome can be defined as the complete set of RNA transcripts produced by the genome at any one time, and transcriptomics as the study of these transcripts. Recent advances in high-throughput technologies have made available groundbreaking methods that enable the characterization of transcriptomes in great detail. The most relevant application of transcriptomic technologies in modern food science include the transcriptome characterization and gene expression analysis in individual organisms, such as food crops, food animals, foodborne pathogens, fermenting microorganisms, and probiotics. As next-generation genome sequencing technologies mature, RNA-seq, a method to detect the presence and quantity of RNA in a given sample, combined with bioinformatics is gaining traction in the investigation of topics in food science that were inconceivable only few years ago (e.g. identification of novel genes not possible previously due to limitations of earlier technologies). Also, this next-generation technology is expected to revolutionize the food microbiology research field by allowing the time- and cost-effective analysis of food microbial communities.
publishDate 2019
dc.date.none.fl_str_mv 2019
2020
2020
dc.type.none.fl_str_mv info:eu-repo/semantics/other
http://purl.org/coar/resource_type/c_3248
Postprint
info:eu-repo/semantics/acceptedVersion
dc.type.openaire.fl_str_mv info:eu-repo/semantics/bookPart
format other
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/206235
url http://hdl.handle.net/10261/206235
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv https://doi.org/10.1016/B978-0-08-100596-5.22555-9
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15.812429

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