The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery

The Semanticscience Integrated Ontology (SIO) is an ontology to facilitate biomedical knowledge discovery. SIO features a simple upper level comprised of essential types and relations for the rich description of arbitrary (real, hypothesized, virtual, fictional) objects, processes and their attribut...

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Detalles Bibliográficos
Autores: Dumontier, Michel, Baker, Christopher JO, Baran, Joachim, Callahan, Alison, Chepelev, Leonid, Cruz-Toledo, José, Del Rio, Nicholas R., Duck, Geraint, Furlong, Laura I., 1971-, Keath, Nichealla, Klassen, Dana, McCusker, Jamie P., Queralt Rosinach, Núria, Samwald, Matthias, Villanueva-Rosales, Natalia, Wilkinson, Mark, Hoehndorf, Robert
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2014
País:España
Institución:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Repositorio:Recercat. Dipósit de la Recerca de Catalunya
OAI Identifier:oai:recercat.cat:10230/58541
Acceso en línea:http://hdl.handle.net/10230/58541
http://dx.doi.org/10.1186/2041-1480-5-14
Access Level:acceso abierto
Palabra clave:Resource description framework
SPARQL query
Relation ontology
Open biomedical ontology
Resource description framework data
Descripción
Sumario:The Semanticscience Integrated Ontology (SIO) is an ontology to facilitate biomedical knowledge discovery. SIO features a simple upper level comprised of essential types and relations for the rich description of arbitrary (real, hypothesized, virtual, fictional) objects, processes and their attributes. SIO specifies simple design patterns to describe and associate qualities, capabilities, functions, quantities, and informational entities including textual, geometrical, and mathematical entities, and provides specific extensions in the domains of chemistry, biology, biochemistry, and bioinformatics. SIO provides an ontological foundation for the Bio2RDF linked data for the life sciences project and is used for semantic integration and discovery for SADI-based semantic web services. SIO is freely available to all users under a creative commons by attribution license. See website for further information: http://sio.semanticscience.org.

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