Data from: ProtASR: an evolutionary framework for ancestral protein reconstruction with selection on folding stability

Simulated data: For all the studies protein families (DNAK, DDL, TPIS, TRPA, TRXB, SH2). - The folder “*SimulatedANDinferredDATA” includes all simulated (true) protein sequence alignments and inferred with ProtASR under MF and the empirical JTT model (both for joint and marginal ASR) - The folder “*...

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Detalles Bibliográficos
Autores: Arenas, Miguel, Weber, Claudia C., Liberles, David A., Bastolla, Ugo
Tipo de recurso: conjunto de datos
Fecha de publicación:2017
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/341541
Acceso en línea:http://hdl.handle.net/10261/341541
Access Level:acceso abierto
Palabra clave:Protein structure
Ancestral Sequence Reconstruction
Folding stability
Molecular adaptation
Protein evolution
Descripción
Sumario:Simulated data: For all the studies protein families (DNAK, DDL, TPIS, TRPA, TRXB, SH2). - The folder “*SimulatedANDinferredDATA” includes all simulated (true) protein sequence alignments and inferred with ProtASR under MF and the empirical JTT model (both for joint and marginal ASR) - The folder “*ComputedEnergiesFromData” includes the calculated energies of sequences of every MSA (files *.dat).