In silico study of basic leucine zipper transcription factors of Carica papaya L.

Transcription factors regulate gene expression by interacting directly with DNA. The class of basic leucine zipper factors or bZIP in arabidopsis has 75 members with similar amino acid domains among all its members. In this work, the papaya genome was studied in silico in order to find possible orth...

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Authors: Idrovo Espín, Fabio Marcelo, Domínguez Bucheli, Karime, Endara Chiriboga, Esmeralda
Format: article
Status:Published version
Publication Date:2021
Country:Ecuador
Institution:Universidad Central del Ecuador
Repository:Revista Química central
Language:Spanish
OAI Identifier:oai:revistadigital.uce.edu.ec:article/2811
Online Access:https://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/2811
Access Level:Open access
Keyword:bZIP, factores transcripcionales, papaya, caricáceas
bZIP
transcription factors
papaya
caricaceae
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spelling In silico study of basic leucine zipper transcription factors of Carica papaya L.Estudio in silico de factores transcripcionales básicos de zipper de leucina de Carica papaya L.Idrovo Espín, Fabio MarceloDomínguez Bucheli, KarimeEndara Chiriboga, EsmeraldabZIP, factores transcripcionales, papaya, caricáceasbZIPtranscription factorspapayacaricaceaeTranscription factors regulate gene expression by interacting directly with DNA. The class of basic leucine zipper factors or bZIP in arabidopsis has 75 members with similar amino acid domains among all its members. In this work, the papaya genome was studied in silico in order to find possible ortholog bZIP genes in papaya. 37 possible sequences were found, the bioinformatics analysis of the sequences was performed. The sequences were grouped and named similarly to the arabidopsis classification. The results presented below could be used to experimentally evaluate the possible biological function of these genes in papaya.Los factores transcripcionales regulan la expresión de genes al interactuar directamente con el ADN. La clase de factores básicos de zipper de leucina o bZIP en arabidopsis posee 75 miembros con dominios de aminoácidos similares entre todos sus miembros. En este trabajo se estudió in silico el genoma de papaya con la finalidad de encontrar posibles genes ortólogos bZIP en papaya. Se encontró 37 secuencias posibles, se realizó el análisis bioinformático de las secuencias. Se agrupó las secuencias y nombró de forma similar a la clasificación de arabidopsis. Los resultados expuestos a continuación podrían ser utilizados para evaluar de forma experimental la función biológica posible de estos genes en papaya.Universidad Central del Ecuador2021-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/281110.29166/quimica.v7i1.2811Química Central; Vol. 7 Núm. 1 (2021): Química Central; 1-72477-91211390-556210.29166/quimica.v7i1reponame:Revista Química centralinstname:Universidad Central del Ecuadorinstacron:UCEspahttps://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/2811/3700Derechos de autor 2021 Fabio Marcelo Idrovo Espín, Karime Domínguez, Esmeralda Endarahttp://creativecommons.org/licenses/by-nc-nd/4.0info:eu-repo/semantics/openAccess2021-07-01T20:05:00Zoai:revistadigital.uce.edu.ec:article/2811Portal de revistashttps://revistadigital.uce.edu.ec/Universidad públicahttps://uce.edu.ec/..Ecuador.2477-91211390-5562opendoar:02024-03-31T15:57:55.889953Revista Química central - Universidad Central del Ecuadortrue
dc.title.none.fl_str_mv In silico study of basic leucine zipper transcription factors of Carica papaya L.
Estudio in silico de factores transcripcionales básicos de zipper de leucina de Carica papaya L.
title In silico study of basic leucine zipper transcription factors of Carica papaya L.
spellingShingle In silico study of basic leucine zipper transcription factors of Carica papaya L.
Idrovo Espín, Fabio Marcelo
bZIP, factores transcripcionales, papaya, caricáceas
bZIP
transcription factors
papaya
caricaceae
title_short In silico study of basic leucine zipper transcription factors of Carica papaya L.
title_full In silico study of basic leucine zipper transcription factors of Carica papaya L.
title_fullStr In silico study of basic leucine zipper transcription factors of Carica papaya L.
title_full_unstemmed In silico study of basic leucine zipper transcription factors of Carica papaya L.
title_sort In silico study of basic leucine zipper transcription factors of Carica papaya L.
dc.creator.none.fl_str_mv Idrovo Espín, Fabio Marcelo
Domínguez Bucheli, Karime
Endara Chiriboga, Esmeralda
author Idrovo Espín, Fabio Marcelo
author_facet Idrovo Espín, Fabio Marcelo
Domínguez Bucheli, Karime
Endara Chiriboga, Esmeralda
author_role author
author2 Domínguez Bucheli, Karime
Endara Chiriboga, Esmeralda
author2_role author
author
dc.subject.none.fl_str_mv bZIP, factores transcripcionales, papaya, caricáceas
bZIP
transcription factors
papaya
caricaceae
topic bZIP, factores transcripcionales, papaya, caricáceas
bZIP
transcription factors
papaya
caricaceae
description Transcription factors regulate gene expression by interacting directly with DNA. The class of basic leucine zipper factors or bZIP in arabidopsis has 75 members with similar amino acid domains among all its members. In this work, the papaya genome was studied in silico in order to find possible ortholog bZIP genes in papaya. 37 possible sequences were found, the bioinformatics analysis of the sequences was performed. The sequences were grouped and named similarly to the arabidopsis classification. The results presented below could be used to experimentally evaluate the possible biological function of these genes in papaya.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/2811
10.29166/quimica.v7i1.2811
url https://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/2811
identifier_str_mv 10.29166/quimica.v7i1.2811
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistadigital.uce.edu.ec/index.php/QUIMICA/article/view/2811/3700
dc.rights.none.fl_str_mv Derechos de autor 2021 Fabio Marcelo Idrovo Espín, Karime Domínguez, Esmeralda Endara
http://creativecommons.org/licenses/by-nc-nd/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Derechos de autor 2021 Fabio Marcelo Idrovo Espín, Karime Domínguez, Esmeralda Endara
http://creativecommons.org/licenses/by-nc-nd/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Central del Ecuador
publisher.none.fl_str_mv Universidad Central del Ecuador
dc.source.none.fl_str_mv Química Central; Vol. 7 Núm. 1 (2021): Química Central; 1-7
2477-9121
1390-5562
10.29166/quimica.v7i1
reponame:Revista Química central
instname:Universidad Central del Ecuador
instacron:UCE
instname_str Universidad Central del Ecuador
instacron_str UCE
institution UCE
reponame_str Revista Química central
collection Revista Química central
repository.name.fl_str_mv Revista Química central - Universidad Central del Ecuador
repository.mail.fl_str_mv .
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score 14.964248

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