Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)

Dendropsophus is one of the most species-rich genera of hylid treefrogs. Recent studies integrating Sanger-generated mitochondrial and nuclear loci with phenomic characters (SP) have advanced understanding of this clade, but questions about its internal relationships and biogeographic history persis...

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Autores: Whitcher, Courtney, Orrico, Victor G.D., Ron, Santiago, Lyra, Mariana L. [UNESP], Cassini, Carla S., Ferreira, Rodrigo B., Nakamura, Daniel Y.M., Peloso, Pedro L.V., Rada, Marco A., Rivera-Correa, Mauricio, Sturaro, Marcelo J., Valdujo, Paula H., Haddad, Célio F.B. [UNESP], Grant, Taran, Faivovich, Julian, Lemmon, Alan, Moriarty Lemmon, Emily
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2025
País:Brasil
Institución:Universidade Estadual Paulista (UNESP)
Repositorio:Repositório Institucional da UNESP
Idioma:inglés
OAI Identifier:oai:repositorio.unesp.br:11449/301943
Acceso en línea:http://dx.doi.org/10.1016/j.ympev.2024.108275
https://hdl.handle.net/11449/301943
Access Level:acceso abierto
Palabra clave:Amphibian
Biogeography
Comparative methods
Neotropical
Phylogenetics
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repository_id_str
dc.title.none.fl_str_mv Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
title Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
spellingShingle Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
Whitcher, Courtney
Amphibian
Biogeography
Comparative methods
Neotropical
Phylogenetics
title_short Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
title_full Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
title_fullStr Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
title_full_unstemmed Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
title_sort Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)
dc.creator.none.fl_str_mv Whitcher, Courtney
Orrico, Victor G.D.
Ron, Santiago
Lyra, Mariana L. [UNESP]
Cassini, Carla S.
Ferreira, Rodrigo B.
Nakamura, Daniel Y.M.
Peloso, Pedro L.V.
Rada, Marco A.
Rivera-Correa, Mauricio
Sturaro, Marcelo J.
Valdujo, Paula H.
Haddad, Célio F.B. [UNESP]
Grant, Taran
Faivovich, Julian
Lemmon, Alan
Moriarty Lemmon, Emily
author Whitcher, Courtney
author_facet Whitcher, Courtney
Orrico, Victor G.D.
Ron, Santiago
Lyra, Mariana L. [UNESP]
Cassini, Carla S.
Ferreira, Rodrigo B.
Nakamura, Daniel Y.M.
Peloso, Pedro L.V.
Rada, Marco A.
Rivera-Correa, Mauricio
Sturaro, Marcelo J.
Valdujo, Paula H.
Haddad, Célio F.B. [UNESP]
Grant, Taran
Faivovich, Julian
Lemmon, Alan
Moriarty Lemmon, Emily
author_role author
author2 Orrico, Victor G.D.
Ron, Santiago
Lyra, Mariana L. [UNESP]
Cassini, Carla S.
Ferreira, Rodrigo B.
Nakamura, Daniel Y.M.
Peloso, Pedro L.V.
Rada, Marco A.
Rivera-Correa, Mauricio
Sturaro, Marcelo J.
Valdujo, Paula H.
Haddad, Célio F.B. [UNESP]
Grant, Taran
Faivovich, Julian
Lemmon, Alan
Moriarty Lemmon, Emily
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Florida State University
Programa de Pós-Graduação em Zoologia
Pontificia Universidad Católica del Ecuador
Universidade Estadual Paulista (UNESP)
New York University Abu Dhabi
Universidade Estadual do Sudoeste da Bahia - Campus Itapetinga
Universidade Federal do Espírito Santo (UFES)
Universidade de São Paulo (USP)
Cal Poly Humboldt
Universidad Nacional de Colombia
Universidad de Antioquia
Universidade Federal de São Paulo (UNIFESP)
The Biodiversity Consultancy
Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” –CONICET
Universidad de Buenos Aires
Center for Anchored Phylogenomics
dc.subject.por.fl_str_mv Amphibian
Biogeography
Comparative methods
Neotropical
Phylogenetics
topic Amphibian
Biogeography
Comparative methods
Neotropical
Phylogenetics
description Dendropsophus is one of the most species-rich genera of hylid treefrogs. Recent studies integrating Sanger-generated mitochondrial and nuclear loci with phenomic characters (SP) have advanced understanding of this clade, but questions about its internal relationships and biogeographic history persist. To address these questions, we used anchored hybrid enrichment (AHE) to combine 432 nuclear loci for 78 taxa (72 % of species) with published data. Quantitatively, the impact of the AHE data was modest, with compositional differences in only three recognized clades and more than 80 % of the clades in the AHE + SP analyses also supported in the SP-only analyses. Nevertheless, the impact of AHE was crucial for resolving and increasing support for multiple nodes. We transferred one species of the former D. ruschii group to the D. decipiens group and redefined the D. leucophyllatus group to avoid paraphyly. We estimated divergence times to reconstruct the clade's biogeographic history. We also examined evolution of oviposition sites and assessed its effect on lineage accumulation. Dendropsophus likely originated ∼ 57 mya, predating the Andean uplift, with some taxa showing dispersal patterns less constrained by ecological changes than previously thought.
publishDate 2025
dc.date.none.fl_str_mv 2025-04-29T19:13:07Z
2025-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.ympev.2024.108275
Molecular Phylogenetics and Evolution, v. 204.
1095-9513
1055-7903
https://hdl.handle.net/11449/301943
10.1016/j.ympev.2024.108275
2-s2.0-85214481730
url http://dx.doi.org/10.1016/j.ympev.2024.108275
https://hdl.handle.net/11449/301943
identifier_str_mv Molecular Phylogenetics and Evolution, v. 204.
1095-9513
1055-7903
10.1016/j.ympev.2024.108275
2-s2.0-85214481730
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Molecular Phylogenetics and Evolution
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
_version_ 1853671780832509952
spelling Phylogenetics, biogeography, and life history evolution in the broadly distributed treefrog genus Dendropsophus (Anura: Hylidae: Hylinae)AmphibianBiogeographyComparative methodsNeotropicalPhylogeneticsDendropsophus is one of the most species-rich genera of hylid treefrogs. Recent studies integrating Sanger-generated mitochondrial and nuclear loci with phenomic characters (SP) have advanced understanding of this clade, but questions about its internal relationships and biogeographic history persist. To address these questions, we used anchored hybrid enrichment (AHE) to combine 432 nuclear loci for 78 taxa (72 % of species) with published data. Quantitatively, the impact of the AHE data was modest, with compositional differences in only three recognized clades and more than 80 % of the clades in the AHE + SP analyses also supported in the SP-only analyses. Nevertheless, the impact of AHE was crucial for resolving and increasing support for multiple nodes. We transferred one species of the former D. ruschii group to the D. decipiens group and redefined the D. leucophyllatus group to avoid paraphyly. We estimated divergence times to reconstruct the clade's biogeographic history. We also examined evolution of oviposition sites and assessed its effect on lineage accumulation. Dendropsophus likely originated ∼ 57 mya, predating the Andean uplift, with some taxa showing dispersal patterns less constrained by ecological changes than previously thought.Florida State University Department of Biological ScienceUniversidade Estadual de Santa Cruz Departamento de Ciências Biológicas Programa de Pós-Graduação em ZoologiaMuseo de Zoología Escuela de Biología Facultad de Ciencias Exactas y Naturales Pontificia Universidad Católica del Ecuador, 12 de Octubre y RocaDepartamento de Biodiversidade and Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista, Avenida 24 A, SPNew York University Abu Dhabi, P.O. Box 129188, Saadiyat IslandDepartamento de Ciências Naturais Universidade Estadual do Sudoeste da Bahia - Campus Itapetinga, BAPrograma de Pós-Graduação em Biologia Animal (PPGBAN) Universidade Federal do Espírito Santo, ESUniversidade de São Paulo Departamento de ZoologiaCalifornia State University Cal Poly Humboldt Department of Biological SciencesLaboratorio de Anfibios Instituto de Ciencias Naturales Universidad Nacional de ColombiaGrupo Herpetológico de Antioquia Instituto de Biología Universidad de AntioquiaUniversidade Federal de São PauloThe Biodiversity Consultancy, 3E Kings ParadeDivisión Herpetología Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” –CONICETDepartamento de Biodiversidad y Biología Experimental Facultad de Ciencias Exactas y Naturales Universidad de Buenos AiresFlorida State University Department of Scientific Computing Center for Anchored PhylogenomicsFlorida State University Department of Biological Science Center for Anchored PhylogenomicsDepartamento de Biodiversidade and Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista, Avenida 24 A, SPFlorida State UniversityPrograma de Pós-Graduação em ZoologiaPontificia Universidad Católica del EcuadorUniversidade Estadual Paulista (UNESP)New York University Abu DhabiUniversidade Estadual do Sudoeste da Bahia - Campus ItapetingaUniversidade Federal do Espírito Santo (UFES)Universidade de São Paulo (USP)Cal Poly HumboldtUniversidad Nacional de ColombiaUniversidad de AntioquiaUniversidade Federal de São Paulo (UNIFESP)The Biodiversity ConsultancyMuseo Argentino de Ciencias Naturales “Bernardino Rivadavia” –CONICETUniversidad de Buenos AiresCenter for Anchored Phylogenomics2025-04-29T19:13:07Z2025-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.ympev.2024.108275Molecular Phylogenetics and Evolution, v. 204.1095-95131055-7903https://hdl.handle.net/11449/30194310.1016/j.ympev.2024.1082752-s2.0-85214481730Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular Phylogenetics and Evolutioninfo:eu-repo/semantics/openAccessWhitcher, CourtneyOrrico, Victor G.D.Ron, SantiagoLyra, Mariana L. [UNESP]Cassini, Carla S.Ferreira, Rodrigo B.Nakamura, Daniel Y.M.Peloso, Pedro L.V.Rada, Marco A.Rivera-Correa, MauricioSturaro, Marcelo J.Valdujo, Paula H.Haddad, Célio F.B. [UNESP]Grant, TaranFaivovich, JulianLemmon, AlanMoriarty Lemmon, Emily2025-11-26T17:36:11Zoai:repositorio.unesp.br:11449/301943Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-11-26T17:36:11Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
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