Linkage group assembly and ordering as a source of spurious otl estimates in mango.

This study aimed to align genetic linkage groups (LGs) with the mango physical map by comparing single nucleotide polymorphism (SNP) sequences in the 'Alphonso' mango genome. SNPs from the mango linkage groups (n=20) were aligned on the chromosomes ofthe genome sequence of the 'Alphon...

Descripción completa

Detalles Bibliográficos
Autores: SANTOS, C. A. F., AQUINO, D. A. L. de, MEDEIROS, F. L. B.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2025
País:Brasil
Institución:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
Repositorio:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Idioma:inglés
OAI Identifier:oai:www.alice.cnptia.embrapa.br:doc/1179066
Acceso en línea:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1179066
https://doi.org/10.24857/rgsa.v19n6-076
Access Level:acceso abierto
Palabra clave:QTL
SNPs
Polimorfismos de nucleotídeo único
Genoma da manga Alphonso
Manga
Melhoramento Genético Vegetal
Mangifera Indica
Mangoes
Descripción
Sumario:This study aimed to align genetic linkage groups (LGs) with the mango physical map by comparing single nucleotide polymorphism (SNP) sequences in the 'Alphonso' mango genome. SNPs from the mango linkage groups (n=20) were aligned on the chromosomes ofthe genome sequence of the 'Alphonso' mango (n=20), evaluating the correspondence between the genetic linkage map and the physical map.