Transcriptome survey of Patagonian southern beech Nothofagus nervosa (= N. Alpina): assembly, annotation and molecular marker discovery
Nothofagus nervosa is one of the most emblematic native tree species of Patagonian temperate forests. Here, the shotgun RNA-sequencing (RNA-Seq) of the transcriptome of N. nervosa, including de novo assembly, functional annotation, and in silico discovery of potential molecular markers to support po...
| Autores: | , , , , , , , , , , , |
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| Tipo de recurso: | artículo |
| Estado: | Versión publicada |
| Fecha de publicación: | 2012 |
| País: | Argentina |
| Institución: | Instituto Nacional de Tecnología Agropecuaria |
| Repositorio: | INTA Digital (INTA) |
| Idioma: | inglés |
| OAI Identifier: | oai:localhost:20.500.12123/8953 |
| Acceso en línea: | http://hdl.handle.net/20.500.12123/8953 https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-13-291 https://doi.org/10.1186/1471-2164-13-291 |
| Access Level: | acceso abierto |
| Palabra clave: | Nothofagaceae Nothofagus Variedades Varieties Pyrosequencing De Novo Transcriptome Assembly Forest Genomics SSRs Functional Annotation Pirosecuenciación Montaje de Transcriptoma de Novo Genómica Forestal Anotación Funcional Región Patagónica |
| Sumario: | Nothofagus nervosa is one of the most emblematic native tree species of Patagonian temperate forests. Here, the shotgun RNA-sequencing (RNA-Seq) of the transcriptome of N. nervosa, including de novo assembly, functional annotation, and in silico discovery of potential molecular markers to support population and associations genetic studies, are described. |
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