Comprehensive analysis of a Metabolic Model for lipid production in Rhodosporidium toruloides
The yeast Rhodosporidium toruloides has been extensively studied for its application in biolipid production. The knowledge of its metabolism capabilities and the application of constraint-based flux analysis methodology provide useful information for process prediction and optimization. The accuracy...
| Authors: | , , , , |
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| Format: | article |
| Status: | Versión aceptada para publicación |
| Publication Date: | 2018 |
| Country: | Argentina |
| Institution: | Comisión de Investigaciones Científicas de la Provincia de Buenos Aires |
| Repository: | CIC Digital (CICBA) |
| Language: | Spanish |
| OAI Identifier: | oai:digital.cic.gba.gob.ar:11746/7752 |
| Online Access: | https://digital.cic.gba.gob.ar/handle/11746/7752 |
| Access Level: | Open access |
| Keyword: | Biotecnología Agropecuaria metabolic modelling lipid production Rhodosporidium toruloides Flux Balance Analysis |
| Summary: | The yeast Rhodosporidium toruloides has been extensively studied for its application in biolipid production. The knowledge of its metabolism capabilities and the application of constraint-based flux analysis methodology provide useful information for process prediction and optimization. The accuracy of the resulting predictions is highly dependent on metabolic models. A metabolic reconstruction for R. toruloides metabolism has been recently published. On the basis of this model, we developed a curated version that unblocks the central nitrogen metabolism and, in addition, completes charge and mass balances insome reactions neglected in the former model. Then, a comprehensive analysis of network capability was performed with the curated model and compared with the published metabolic reconstruction. The flux distribution obtained bylipid optimization with Flux Balance Analysis was able to replicate the internal biochemical changes that lead to lipogenesis in oleaginous microorganisms. These results motivate the development of a genome-scale model for completeelucidation of R. toruloides metabolism. |
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