Fusarium graminearum species complex: a bibliographic analysis and web-accessible database for global mapping of species and trichothecene toxin chemotypes

Fusarium graminearum is ranked among the five most destructive fungal pathogens that affect agroecosystems. It causes floral diseases in small grain cereals including wheat, barley, and oats, as well as maize and rice. We conducted a systematic review of peer-reviewed studies reporting species withi...

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Detalhes bibliográficos
Autores: Del Ponte, Emerson M., Moreira, Gláucia M., Ward, Todd J., O'Donnell, Kerry, Nicolli, Camila P., Machado, Franklin J., Duffeck, Maíra R., Alves, Kaique S., Tessmann, Dauri J., Waalwijk, Cees, van der Lee, Theo, Zhang, Hao, Chulze, Sofia Noemi, Stenglein, Sebastian Alberto, Pan, Dinorah, Vero, Silvana, Vaillancourt, Lisa J., Schmale, David G., Esker, Paul D., Moretti, Antonio, Logrieco, Antonio F., Corby Kistler, H., Bergstrom, Gary C., Viljoen, Altus, Rose, Lindy J., van Coller, Gert J., Lee, Theresa
Formato: artículo
Estado:Versión publicada
Fecha de publicación:2022
País:Argentina
Recursos:Consejo Nacional de Investigaciones Científicas y Técnicas
Repositorio:CONICET Digital (CONICET)
Idioma:inglés
OAI Identifier:oai:ri.conicet.gov.ar:11336/162336
Acesso em linha:http://hdl.handle.net/11336/162336
Access Level:acceso abierto
Palavra-chave:FUSARIUM GRAMINEARUM
BIBLIOGRAPHIC ANALYSIS
GLOBAL DATABASE
https://purl.org/becyt/ford/4.1
https://purl.org/becyt/ford/4
Descrição
Resumo:Fusarium graminearum is ranked among the five most destructive fungal pathogens that affect agroecosystems. It causes floral diseases in small grain cereals including wheat, barley, and oats, as well as maize and rice. We conducted a systematic review of peer-reviewed studies reporting species within the F. graminearum species complex (FGSC) and created two main data tables. The first contained summarized data from the articles including bibliographic, geographic, methodological (ID methods), host of origin and species, while the second data table contains information about the described strains such as publication, isolate code(s), host/substrate, year of isolation, geographical coordinates, species and trichothecene genotype. Analyses of the bibliographic data obtained from 123 publications from 2000 to 2021 by 498 unique authors and published in 40 journals are summarized. We describe the frequency of species and chemotypes for 16,274 strains for which geographical information was available, either provided as raw data or extracted from the publications, and sampled across six continents and 32 countries. The database and interactive interface are publicly available, allowing for searches, summarization, and mapping of strains according to several criteria including article, country, host, species and trichothecene genotype. The database will be updated as new articles are published and should be useful for guiding future surveys and exploring factors associated with species distribution such as climate and land use. Authors are encouraged to submit data at the strain level to the database, which is accessible at https://fgsc.netlify.app.

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